BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011F02LP1|AL426236
(796 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1209 1578 0.0
>3x_Contig1209
Length = 5033
Score = 1578 bits (796), Expect = 0.0
Identities = 796/796 (100%)
Strand = Plus / Minus
Query: 1 tctcagttaactgatgccatagcttcctctcatacaagtcttcaaaatcgtcgaataatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2713 tctcagttaactgatgccatagcttcctctcatacaagtcttcaaaatcgtcgaataatg 2654
Query: 61 gggccaattcactattgacttcctgcttcaatgtagataatatggtgtcaatttcgtgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2653 gggccaattcactattgacttcctgcttcaatgtagataatatggtgtcaatttcgtgtg 2594
Query: 121 tcatattttgactatttaagcttgctgaagtgctgttagtcgtgcgatgtatgccttaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2593 tcatattttgactatttaagcttgctgaagtgctgttagtcgtgcgatgtatgccttaat 2534
Query: 181 ctataatctttaatattctgttcgccaccttacatttcagaaggtgtatcgatctatata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2533 ctataatctttaatattctgttcgccaccttacatttcagaaggtgtatcgatctatata 2474
Query: 241 tttcatatttacaaaacgtcaatcgaagcatgaaagtcgttaataatgacaattctccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2473 tttcatatttacaaaacgtcaatcgaagcatgaaagtcgttaataatgacaattctccaa 2414
Query: 301 acaaatgctgtgagaagtggatgaactagatatgtgacagcaaatcatctccatctgcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2413 acaaatgctgtgagaagtggatgaactagatatgtgacagcaaatcatctccatctgcac 2354
Query: 361 tttcatcatcaaataatgtagttcaatgcaatacttcatgcctttctttttgagatataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2353 tttcatcatcaaataatgtagttcaatgcaatacttcatgcctttctttttgagatataa 2294
Query: 421 accttttatatgctatctatagactgtttggcatttttccaagactctgaacaatccttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2293 accttttatatgctatctatagactgtttggcatttttccaagactctgaacaatccttt 2234
Query: 481 aaccatgatgttatattgtgggctagttcgcggaaaatgaggaaccacttctcatggaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2233 aaccatgatgttatattgtgggctagttcgcggaaaatgaggaaccacttctcatggaaa 2174
Query: 541 tatttctctaagttattcaaagagttatccattgactcattgacttgttgtaagtccttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2173 tatttctctaagttattcaaagagttatccattgactcattgacttgttgtaagtccttt 2114
Query: 601 tcgatgagtttgaaacattcattcagtttttcaagttccttttctagtttgtttacctgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2113 tcgatgagtttgaaacattcattcagtttttcaagttccttttctagtttgtttacctgt 2054
Query: 661 acaacccgttcgtctttagttagaagatgaggttcgacttcacttgaaatcgaatcagat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2053 acaacccgttcgtctttagttagaagatgaggttcgacttcacttgaaatcgaatcagat 1994
Query: 721 ccagacttgttgtttggagatgctgatgacctgaaaagccccattatctgtttgtccgtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1993 ccagacttgttgtttggagatgctgatgacctgaaaagccccattatctgtttgtccgtg 1934
Query: 781 tgattcttgtttgctg 796
||||||||||||||||
Sbjct: 1933 tgattcttgtttgctg 1918
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6634
Number of Sequences: 1807
Number of extensions: 6634
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 796
length of database: 10,358,551
effective HSP length: 16
effective length of query: 780
effective length of database: 10,329,639
effective search space: 8057118420
effective search space used: 8057118420
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)